PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1129s0043.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 361aa    MW: 40386 Da    PI: 10.0023
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1129s0043.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.48.1e-1823109183
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                          +Wt++e+laLi+ +r+++ +lrrg l+ ++W++v++++    r+    +s+ qC++k+e+l++ry+++k++      +  s +++f+
  Kaladp1129s0043.1.p  23 CWTHDETLALIDTYRDRWIALRRGYLRTADWDAVASAVaqrcRHVTPPKSSDQCRHKMEKLRQRYRAEKQRCVAFPGRFFSAWVFFK 109
                          8*********************************99997765666668999******************987665555556666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-1722111No hitNo description
PROSITE profilePS500906.1562484IPR017877Myb-like domain
SMARTSM005955.5E-731119IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MSSASTPALP PPPATTRKVP LPCWTHDETL ALIDTYRDRW IALRRGYLRT ADWDAVASAV  60
AQRCRHVTPP KSSDQCRHKM EKLRQRYRAE KQRCVAFPGR FFSAWVFFKV LSFLDDGGGS  120
AQTKKRAAEA KAVDPVRQLS SDDGFFLTAL GDRKFTIDLK TFAKIDDQIQ NSSFGIRRNV  180
PSPPEQNIEP SMNRYASGLN HSFSRDDVDD DLHEQISLHK GSFIRPDKAG TAAGYAGRNL  240
VFDVDGGFNL SGGVSGKLHS SMKFVDSKPK ITPNHHQAVG DNGEGVDPLA EMATSIKLLG  300
DGFLKMEKMR MEMAVEFEKA RIEVELKRNE LIMESQRRIV DAFMRAAKRK KTKKEVHSET  360
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-31Trihelix family protein